Oh, after watching some Naruto videos and actually thinking for a bit...
Half of the Leaf's noble clans should be on the verge of rebellion, or just particularly dissatisfied with the village in general, and it's their two strongest clans to boot :v
The Uchiha for obvious reasons, but if you look at the Hyuga incident more closely, they have plenty of reason to be dissatisfied with the Village.
After Kumo signed a peace treatment with the Leaf, they sent their Head Ninja as a diplomat to the leaf, and as we know the head ninja tried to Kidnap a Hyuga (Hinata) and was killed in the process.
Now, instead of doing what canon did; which was Kumo demanded that the Hyuga responsible for the death of their head ninja be sent to them in compensation, and for some reason the leaf buckled and actually did it (Merely replacing Hiashi with Hizashi so that the fate-seal could protect the Byakugan)
Take a moment to notice that; not only did Kumo break their peace treat the day after it was signed, they also got caught try to kidnap a Hyuga, then demanded compensation for getting caught; which the leaf agreed to :v
Can't outright revolt, but the clan as an entity would certainly remember the leaf's stance during the incident.